Chapter 10: Molecular Biology of the Gene

R" non-virulent

Harmless

S" virulent

Harmful

Frederick Friffith

Tests mice with R and S bacteria (harmless and harmful) and together to see cell transformation

Oswald Avery

Shows DNA can transform bacteria (1944)

Alfred Hershey and Martha Chase

Use bacteriophage (virus) to confirm DNA is genetic material (1952)

Hershey-Chase Experiment

Make radioactive proteins and DNA to see which is passed down

James Watson and Francis Crick

Discover double helix of DNA

Rosalind Franklin

Took X-Ray crystallography of DNA

Chargaff's Rule

#A=#T; #C=#G

Phosphate group

Makes DNA acid (also negatively charged)

5 carbon sugar

Deoxyribose(DNA) Ribose(RNA)

Pyrimidines

Single ring bases (T, C, U)

Purines

Double ring bases (A, G)

Binding patterns

T+A=2 hydrogen bond; G+C=3 hydrogen bond

Semi-conservative

DNA replication- uses one half to make new strand

Helicase

Splits Hydrogen bonds/unzips DNA

Binding proteins

Keep unzipped DNA apart

Primase

Makes short RNA primer

DNA polymerase

Adds complementary nucleotide to parent strand

RNase H

Cuts out original primers

DNA polymerase

Fills in gaps of removed primer

DNA ligase

Glues sugar/phosphate backpone

Topoisomerase

Prevents further coiling at replication fork

Anti-parallel

Each strand of double helix is oriented in opposite direction

Prime" #

Carbons in the sugar (open)

3' Carbon

Where you build off of/towards (OH on end)

5' Carbon

Can't build off of (Phosphate/PO4- at end)

5' to 3'

Way DNA grows

Leading strand

Daughter stand made continuously

Lagging strand

Made in series of short pieces (Okazaki fragments)

2-3 stable changes in DNA per year

How many wrong sequences there are

Gametogenisis

Where inheritable changes occur

Cysitic fibrosis

Deletion of 3 nucleotides

Sickle cell anemia

One nucleotide substitution in hemoglobin gene

Nutagen

A mutation causing substance

Structural Genes

Have info to make proteins

Regulatory genes

Code for "on/off switch" protiens

Third type of gene

Genes that code for tRNA, rRNA, histones

mRNA

Copies DNA message and brings to cytoplasm

tRNA

Carries amino acids to mRNA/builds protein

rRNA

Major part of Ribosome

Transcription

DNA to RNA

Translation

RNA to protein

RNA polymerase

Splits DNA and travels along- making RNA

Termination signal

Tells RNA polymerase to stop

Introns

Extra DNA

Exons

DNA coding for stuff

Cap

Start side of mRNA (7-methyl guanine)

Tail

50 Adenine tail to mRNA

Splicosome

SNRP's and other proteins that cut out introns and glue exons together

Codon

RNA triplet

Degenerate nature

More than one codon for amino acids

Anticodon

Part of tRNA that attaches to codon of mRNA

Peptide bonds

Bonds between amino acids/proteins

P site

Where protein is growing

A site

Where amino acids are brought in

E site

Where empty tRNA exits ribosome

Missense

Point mutation alters amino acid sequence

Point muation

Substitution

Silent mutation

Point mutation does not alter amino acid sequence

Frame Shift mutation

Insertion or deletion

Nonsense mutation

Premature stop codon

Capsid

Protein shell of virus

Lytic

Cell immediately begins reproducing virus and bursts

Lysogenic

Viral DNA stays in host cell without producing viruses

HIV

Contains 2 copies of RNA

Reverse transcriptase

Turns RNA into DNA in HIV