Microbiology Principles of Disease and Epidemiology

pathology

study of disease

etiology

study of the cause of disease

pathogenesis

development of disease

infection

colonization of the body by pathogens

disease

an abnormal state in which the body is not functioning normally

Transient Vs. normal microbiota

transient maybe be present for days weeks months. normal microbiota permantly colonoze the host.

Locations of normal flora

eyes, nose and throat(upper respritory system), skin, large intestine, urinary and reproductive systems(lower urethra)

microbial antagonism

competition between microbes

how do normal flora protect host

occupying niches that pathogens might occupy, producing acids, producing bacteriocins

Probiotics

live microbes applied to or ingested into the body, intended to exert a beneficial effect (yogurt)

Koch's postulates

used to determine etiology using pure culture and mice. Isolated, grown in pure culture, identified, injected, isolated, grown, identified.

symptom

any sensation or change in bodily function that is felt by a patient as a result of disease. chills, sore throat, pain, nausea, itching, headache.

sign

a change in a body that can be measured or observed as a result of disease. fever, septicemia, chest sounds, skin eruptions, swollen lymph nodes, tachycardia. etc.

syndrome

a group of symptoms or signs that collectively accompany a disease

communicable disease

a disease that is spread from one host to another, ex. HIV

contagious disease

a disease that is EASILY spread from one host to another ex. cold and measles

noncommunicable disease

a disease that is not transmitted from one host to another. ex: tetanus, gangrene, food poisoning

sporadic disease

Disease that occurs occasionally in a population

endemic disease

diseases that are constantly present in the population (ex. cold)

epidemic disease

Disease acquired by many hosts in a given area in a short time. (ex. flu, malaria)

pandemic disease

Worldwide Epidemic (ex. HIV)

herd immunity

immunity in most of a population

acute disease

symptoms develop rapidly (ex. cold)

chronic disease

disease develops slowly (ex. Hepitits and TB)

Latent Disease

Disease with a period of no symptoms when the patient is inactive. (ex. herpes and shingles)

Local Infection

pathogens limited to a small area of the body (ex. pimple)

Systemic infection

An infection throughout the body (ex. HIV)

Bacteremia

bacteria in the blood

septicemia

growth of bacteria in the blood

toxemia

toxins in the blood

viremia

viruses in the blood

primary infection

Acute infection that causes the initial illness

secondary infection

Opportunistic infection after a primary (predisposing) infection

subclinical disease

no noticeable sings or symptoms (inapparent infection) (ex. hep. A)

predisposing factors

(make the body more susceptible to disease) short urethra in females and UTIs, inherited traits such as sickle cell gene, fatigue, age, lifestyle, chemotherapy, nutrition

reservoir

anything (a person or animal or plant or substance) in which an infectious agent normally lives and multiplies aka. continual sources of infection.

3 reservoirs of infection

human, animal, nonliving

human reservoir

aids, gonorrhea, hepatitis, colds, strep. -carriers may have inapparent infections or latent disease

animal reservoir

rabies, lyme disease, influenza. -about 150 zoonoses may be transmitted to humans

nonliving reservoir

botulism, tatanus. -soil and water

methods of transmission

contact, vehicle, vector

contact transmission

direct- kiss, sex touch
indirect- via fomites(needle, door handle)
droplet-mucous(sneeze)

vehicle transmission

airborne >1m
water
food

vector transmission

mechanical- carries pathogen on feet then lands on you/food. ex. cholera
biological- pathogen reproduces in vector and is transmitted through a bite ex. malaria
may involve antropods- mosquito/tick.

Nosocomial infections

hospital acquired infections
5-15% of all patients aquire nosocomial infections

most common nosocomial infections

UTI- 40%
surgical site infections- 30%
Lower respritory- 20%

common causes of nosocomial infections

25% coagulase-negative staphlococci (89% resistant to antibiotics)
16% s. aureus (80% resistant to antibiotics)
10% enterococcus (29% resistant)
23% gram neg rods (5-32% resistant)
13% c. difficle (none resistant)

How many disease are reported at national level?

63 diseases

Koch's postulate 1

the same pathogen must be present in every case of the disease

koch's postulate 2

the pathogen must be isolated from the diseases host and grown in a pure culture

koch's postulate 3

the pathogen from the pure culture must cause the disease when it is inoculated into a healthy, susceptible lab animal

koch's postulate 4

the pathogen must be isolated from the inoculated animal and must be shown to be the original organism

commensalism

one benefited, other unaffected

mutualism

both benefited

parasitism

one benefited, other affected

incidence

contracts disease during specific time

prevalence

having disease during specific time

Snow

cholera

Semmelweis

Puerperal fever

Nightingale

Typhus

Epidemiology

study of where and when disease occur

morbidity/rate

incidence of a specific notifiable disease/# affected

mortality/rate

deaths from notifiable diseases/# of deaths