Microbiology Chapter 1-4+

Antonie Van Leeuwenhoek

observed "animalcules" from teeth scraping. First observed sperm.

Edward Jenner

used first scientific vaccination (small Pox)

Alexander Fleming

discovered penicillin

Louis Pasteur

Supported Germ Theory of disease

Louis Pasteur

disproved Spontaneous generation with flask experiments.

Hans Christian Gram

developed first gram stain

Lous Pasteur

developed rabies vaccine

Paul Ehrlich

develops cure for syphilis (chemotherapy) used mercury first then switched to arsonic.

Paul Ehrlich

Performs acid-fast stain

Robert Koch

fromed series of proofs verifying the germ theory could establish an organism and patho cause

Robert Koch

Proved Germ theory using B. anthracis

Joseph Lister

practices antiseptic surgery using phenol (carbolic acid)

Walter Reed

Proved that mosquitos carried yellow fever

Robert Koch

1881- grows bacteria on solid media (Hesse probably did use agar first)

Francisco Redi

used meat experiment with maggots to begin showing spontaneous generation wasn't true.

Semmelweis

advocated hand washing. Was fired because he insisted people wash hands.

Robert Hooke

First to use the term "cell" . Stated that when looking at a cell through a microscope it looked like a prison or cell. Also observed hairy mold.

Lous Pasteur

Fermentation and Pasteurization

Kosh Postulates

Isolate the suspected agent from disease vitcim. Grow agent in pure culture. Infect new host showing the organism produces the classic clinical case. Isolate same organism from new victim.

Elie Metchnikoff

discovered WBC phagocytes digesting bacteria

Decomposers

Importance function of microbes. They break things down.

Bacteria and Fungi

Two Main decomposers

cheese or mushrooms

Food that is dependant on Microbes

Saccharomyces

A genus in the Kingdom of fungi that includes many species of yeast. They do fermentation (Alcohol)

Ethanol

a gas made from saccharomyces

Archaea, Bacteria and Eukarya

The 3 main domains of living things, three domains

Prokaryotic

From Archea and Bacteria domain. Have no true nucleus.

Archaea

Kingdom Archaebacteria, domain which consists of single-celled prokaryotes that have distinctive cell membranes and cell walls (Archaeabacteria)

Halophiles

Love Salt ( Archea)

Barophiles

organisms that live under extreme pressure (BOTTOM OF OCEAN) Archaea

Psychrophiles

Loves cold temps (Kingdom Archaea), cold loving microbes

Alkaliphiles

alkali loving; pH 7.0-11.5 (archaea)

Acidophiles

Acid Lover (H.pyloria) lives in stomach. Archaea

methanogens

make methane gas. Archaea

thermofiles

Like it hot Archaea

Domain Bacteria

Newer Bacteria, Stap, strep etc. (Kingdom Eubacteria)

Domain Eukarya

Eukaryotes, have nuclear membrane. Include Kingdom Protisa, Kingdom fungi, Kingdom, Plantae, and Kingdom Animalia.

Domain Archaea

Kingdom Archaebacteria

Kingdom Protista

made up of a variety of eukaryotic, mostly single-celled organisms. Kingdom composed of eukaryotes that are not classified as plants, animals, or fungi. Some are like plants, animals, or fungi but not classified as them. "Junk Drawer" Kingdom.

Kingdom Fungi

This kingdom contains Yeast and molds (candida Albicans) thrush.

Kingdom Plantae

multicellular plants. (ex. Oak tree)

Kingdom Animalia

Multicellar. Mouse, coral reef, sea sponge

Kingdom Fungi

Molds that grown in human body such as aspergilus. (farmer's lung).

Kingdom Protista

Animal like (ameba) Plant like (algae) Fungus like (slime mold)

Malaria

Most Important Slime mold

Phycology

Study of Algae. Kingdom Protista

Virology

Study of viruses

Bacteriology

Study of Bacteria

Mycology

Study of fungi (Kingdom fungi) domain eukarya

Microflora

Microscopic plant life and bacterial colonies found in the gut of healthy animals and humans. Kingdom Plantae (Plant that lives in humans)

Glucose

Best quick source of energy

fructose

Second quickest source of energy

Bacteriophages

viruses that infect bacteria

Virus

World's best mutaters, (virology) ultramicroscopic infectious agent that replicates itself only within cells of living hosts. Then bust from cells and invade other cells.

Taxomy

the science of nameing and classifying organisms. Karl Linne

Scientific Method

a series of steps followed to solve problems including collecting data, formulating a hypothesis, testing the hypothesis, and stating conclusions

Binomial System

Identifying organisms by their Genus and species names. Karl Linne. Genus (first letter) always capitalized and italized or underlined. Species always written second never capitalized and italized or underlined.

Old Kingdoms

Monera, Protista, Fungi, Plantae, Animalia

Matter

All tangible materials that make up space

Atom

Tiny particles that cannot be subdivided into smaller substances without losing it's properties.All physical things are made of these

Protons

In the nucleus of an atom(postively charged)

Neutrons

Neutral charge. Located in the nucleus of an atom.

Electron

Negatively charged. Found in outer shell of an atom.

Elements

when subatomic particles (Protons, Neutrons, and Electrons) come together in specific, varied combinations, they form unique types of atoms.

Isotopes

variant forms of the same element that differ in numbers of neutrons.

Orbitals

volumes of space in which an electron is likely to be found

Atomic Number

The number of protons in the nucleus of an atom= the atomic number. Ex. Carbon and only carbon have six protons so carbon's atomic number is 6. It never changes.

Atomic Weight

Total weight of an atom. Equal to the number of protons and neutrons with little extra added by the electrons.

Molecule

is a distinct chemical substance that results from the combination of two or more atoms.

Compounds

Molecules that are combinations of two or more different elements.

Ion

atom that has a positive or negative charge

Cation

is a positively charge ion

Anion

negatively charged ion

Ionization

this occurs when the bond is broken and the atoms dissoicate into unattached charges particles (ions).

Ionic Bond

electrons are transferred completely from one atom to another and are not shared

Covalent bond

Sharing bond rather that donating or receiving them

Hydrogen Bond

doesn't involve sharing, losing, or gaining but instead are due to attractive forces between nearby molecules or atoms. Weak Bond. (Water Bond)

Van der Waals forces

Noncovelant associations between moelcues. Weak attraction that occur between molecues that demonstrate low levels of polarity.

Reactants

Molecules entering or starting a reaction

Products

substances left by a reaction

Cataylst

Increases rate of reaction

Solution

Mixture of one or more substances

Solutes

substances dissolved in a liquid

Solvent

a liquid substance capable of dissolving other substances. Dissolving media

Concentration

Expresses the amount of solute disolved in a certain amount of solvent. Cannot be separated by filtering or separating.

Hydrated

when an ion is surrounded by a sphere of water molecules

hydrophilic

Molecules such as salt or sugar that attract water to their surfaces (Water Loving)

Hydrophobic

nonpolar molecules such as benzene, that repel water.(Water fearing)

Metabolism

All chemical reactions that happen in the cell.

Catabolism

disintegration of complex organic compounds to release engery (Breaking down).

Anabolism

the arrangement of organic compounds from simpler compounds (building up)

Acidic

A solution when disolved in water releases excess Hydrogen ions (+)

Basic

when disolved release excess hydroxl ions (-) akaline

PH Scale

measurement system used to indicate the concentration of hydrogen ions (H+) in solution; ranges from 0 to 14. O is most acidic + and 14 is most basic + or akaline.

Macromolecules

four main classes of large biological molecules (carbohydrates, lipids, proteins, nucleic acids)

Monomers

small unit that can join together with other small units to form polymers

Carbohydrate

A class of nutrients made of sugars; these nutrients include sugar, starch, and fiber. All but fiber provide energy. Often referred to in the plural, carbohydrates.

Saccharide

a simple sugar or combination of sugars; a carbohydrate

monosaccaharide

a simple sugar such as glucose or fructose that cannot be broken down into simpler sugars

disaccharide

a sugar formed from two monosaccharides

Polysaccharide

a complex molecule composed of three or more monosaccharides. (Plants make them and store as starch) We store as fat (glycogen)

Triglycerides

Large fat molecules composed of three parts fatty acid and one part glycerol (Fats and Oils) Major component of cell membranes. (lipid)

Phospholipid

Fatty acid +glycerol+phospate., a lipid made of a phosphate group and two fatty acids

Waxes

Fatty acids, alcohols= Mycolic acid (cell wall of mycobacteria)

Steriods

Ringed structures Ex. Cholesterols, egosterol. (Membrane of eukaryotes and some bacteria)

Proteins

contains carbon, hydrogen, oxyge, and nitrogen. source of energy. needed by tissue for repair and growth. made up of 20 amino acids.

Nucleic Acids

Polymers assembled from individual nucleotides; used to store and transmit hereditary, or genetic, information; the two kinds of nucleic acids are ribonucleic acid (RNA) and deoxyribonucleic acid (DNA) (p. 47).

Purines

Adenine and Gaunine

Pyrimidines

Thymine, cytosine, and uracil

Uracil

replaces thymine in RNA

nucelotides

made up of a 5 carbon sugar, a phosphate, and a nitrogen containing base.

Cell

smallest living thing

histomes

helps dna curl

Enzymes

proteins that act as biological catalysts, protein substances that speed up chemical reactions.

xx

female

xy

male

Vitamin B and C

Water soluble vitamins

Vitamin K A D E

Fat Soluble vitamins

Co enzymes

An organic molecule that is a necessary participant in some enzymatic reactions; helps catalysis by donating or accepting electrons or functional groups; e.g., a vitamin, ATP, NAD+.

Water

Universal Solvent (more things disolve in this than anything)

Solution

Solvent+Solute

cohesiveness

water molecules sticke together.

Adhesive

stick to other things. Water molecules are also cohesive

Water

Stable (freezing O celius) 32 fahrenheit. Boiling 100 celcius, 212 F. Most dence at 4 degrees Celcius.

carbohydrates

breads, rice, potatoes, fruits, wheat, corn. Come from plants. Also a sugar. Quickest from of energy.

Insulin

Needed by the body to convert gylcogen to glucose

Cationic stains

Methylene blue, crystal violent , malachite green, safrinin. Simple positive charge stain.

Anionic Stain

Congo Red, Nigrosin (Indian Ink) stains background (simple stain)

Gram stain

(differential Stain)stain that determines cell wall thickness.

Mordant

Intensifies color in stain. Grams iodine

Media

Natural (Nautral enviroment) Also synthetic Agar (red Algae) could also use gelatin.

General Purpose Agar

Tryptic Soy Agar (TSA) Most bacteria grow on TSA

Enriched Media

Blood Added for hemolytic (sheep blood) Chocolate agar- heated sheeps blood. Also Tomato juice is used for Acid Agar.

MacConkey Agar (MAC)

Gram negative bacteria like it. Gram + don't like to grow on it.

Manatol Salt Agar (MSA)

agar used for growing halophiles

Sabouraud Dextrose Agar (SDA)

Great for growing Fungus

Cellulose (Fiber)

The one carbohydrate you can't digest. Found in plant cell walls.

carbohydrate

C H 2 0 x any number is a

Fats

From animals, solid at room temp. saturated (with hydrogens) (lipid)

Oils

Plants, liquid, unsaturated.

triglycerides

Large fat molecules composed of three parts fatty acid and one part glycerol.

Waxes

Comes from plants. We scrape it off (Lipid)

Steriod Hormones

make secondary sex characteristic in pubery. Female (estrogen, Progesterone), Male (testosterone)

Kilograms

About half of pounds

millimeter (MM)

a metric unit of length equal to 0.1 of a centimeter. Ex. 29.7mm = 2.97 cm(cenimeters) CM to MM. 24.6cm = 246mm

Refraction

the bending of light

Reflection

What we see

Absorption

Dark Colors

Diffraction

light goes through tiny holes

Dark field Microscope

A microscope that brightly illuminates the specimen while leaving the background dark ( USES DARKNESS)

Phase contrast Microscope

Microscope that uses No staining. Brings out more contrast

Nomarski Microscope

Microscope High Power (high resolution) Almost 3D

Electron Microscope

Uses up to 1 million xpower closely guarded.

Compound Micrscope

Microscope-More than one lense. 1000x 1500x

Scanning Probe Microscopy

Resolving power greater than Electron Microscope. No prep. Very detailed view of molecules in a cell. Looks at surfaces of things.

Wet Mount

a slide with a drop of water

Differential Stain

Stains for different features or qualities

Smear

smeared on slide.

Light visible spectrum

violent

sarcinae

cocci that divide in 3 planes and remain attached in cubelike groups of 8 (arrangement)

strepto

chains (arrangement)

staphylo

clusters (arrangement)

tetra

four (arrangement)

Coccus

sphere round (shape)

Bacillius

Rod (shaped)

Vibrio

comma (shaped)

Spirillum

spiral and corkscrew-shaped prokaryotes (flagella) (Shape)

Spirochete

member of a group of large spiral-shaped bacteria (shape)

Pleoomorphism

Variety of shape (SHAPE)

Gram Postive

Cell wall is thick (Thick peptidogylcan layer) murien Old name for pepti..

Gram Negative

Cell wall is thinner but contains Lipoplysaccharid. Harder to penetrate

Ribomes 80s

Number of ribosome in Eukarya

Ribosomes 70s

Number of Ribsomes in Prokaryotic

Teichaic Acid

Impregnated throughout peptidogylcan.

Protoplasts

a plant or bacterial cell without its cell wall

Spheroplasts

gram negative bacteria with missing cell wall

Ribosomes

site of protein synthesis/ Make Amino Acids.Proteins

chromatophores

color indicators

Endospore

a thick-walled protective spore that forms inside a bacterial cell and resists harsh conditions. Build Thick coating of Dipicoliniic acid and calicum then die. Ferms and Molds. Living Stage is Vegative.

Endospore bacteria

Closteridium tetani, Clostridum botulinum,Bacillus anthracis. Single bacillus shape.

Flagella

whiplike tails found in one-celled organisms to aid in movement

Pili

Appendages that allow bacteria to attach to each other and to transfer DNA

Glycocalyx

Anything outside of cell wall. Slime (Most common) If harders becomes a capsule. Most bacteria that cause pneumonia have capsules.

Monotrichous

A term given to a single flagellum located on the end of the cell.

Amphitrichous

flagella at both poles of the cell

Lophotrichous

cluster of flagella at one or both ends

Peritrichous

covered all over with uniformly distributed flagella

Atrichous

No Flagella

Chemotaxis

movement by a cell or organism in reaction to a chemical stimulus

Phototaxis

response to light

Nucleus

Part of Eurkayotic cell that has dna (cell of instructions)

Ribosomes

(Eukaryotic) part of the cell that makes amino acids (organelle)

Golgi Apparatus

Fedex of the cell. Stores Packs etc, (Eukaryotic) (organelles)

Vacuoles

saclike structures that store materials such as water, salts, proteins, and carbohydrates (Overflow storehouse) (organelle

organelle

a specialized part of a cell

Peroxisomes

membranous sacs containing enzymes used to break down hydrogen peroxide

Lysosomes

An organelle containing digestive enzymes that can break down many things in cells.

Rough ER

ER that is dotted with ribosomes (makes AA)

Smooth ER

Makes Lipids, Horomes, and detoxifies (Takes ETOH) out of the body.

Mitochondria

Powerhouse of the cell, organelle that is the site of ATP (energy) production

Diffusion

process by which molecules tend to move from an area where they are more concentrated to an area where they are less concentrated

Osmosis

The diffusion of water across a selectively permeable membrane

Facilitated Diffusion

the transport of substances through a cell membrane along a concentration gradient with the aid of carrier proteins (HELPED TRANSPORT) FLOWER OPENING.

ACTIVE TRANSPORT

the movement of materials through a cell membrane using energy. Jump across by ATP. Sodium Potasium Pump.

Endocytosis

process by which a cell takes material into the cell by infolding of the cell membrane by several little steps.

Exocytosis

process by which vesicles release their contents outside the cell. Step process.

glycoprotein

a protein covalently attached to a carbohydrate. (Flag)

cholesterol

glue that holds molecules.

Cell Envelope

(Prokaryotic Cell) includes the outer membrane, cell wall and cell membrane

External (Prokaryotic)

Appendages, Flagella, Pili, Fimbriae, Glycocalyx, Capsule (slime layer)

motility

self propulsion

filament

a helical structure in diameter and varies from 1 to 70 microns in length. Part of flagella.

glycan

repeating chains of sugar that make up peptidogylcan

Lysis

disintegration or rupture of the cell.

Gram Posiitve

This cell type contains teichoic acid and lipoteichoic acide

Mycoplasma

bacteria that lack cell wall

pleomorphic

very small bacteria, ranging from .01 to.5 um in size

plasmids

area in bacteria that contains dna

sporulation

asexual reproduction by the production and release of spores

sporangium

sporulating cell. (transforming stage)

coccusbacillus

short plump rod

phenotypic

of or relating to or constituting a phenotype, Microscopic morphology, determines size shape and staining characteristics of the organism. Antibodies used against carb & protein composition. Fatty acid composition. Biochemical test (pH indicator)

Bergy's manual of Determinative Bacteriology

Book on identifying unknown bacteria.

Aerobic

Bacteria that use oxgyen in metabolism

Anaerobic

Bacteria that do not use oxygen in metabolism

hyperthermophilic

love high temps

tumble

when flagella reverse direction and cause the cell to stop and change course.

Gram Positive

stain purple

Gram Negative

bacteria that is made up of lipopolysaccharid and does not retain purple stain, appears red/pink/orange after Gram straining procedure.

cytoplasm

water based solution filling entire cell

fimbriae

hair like structures extending from cell to help with adhesion.z (prokaryotic)

culture

the raising of plants or animals, (biology) the growing of microorganisms in a nutrient medium (such as gelatin or agar)

inoculation

growing media on a medium in an eniviroment in which they multiply.

incubation

time for growing bacteria

isolation

separating types of cells

colony

discrete mound of cells

pure culture

container of medium that grows only a single known species

real image

formed by objective lens