Forensics chapter 9 (DNA)

Chromosome

A threadlike structure in the cell nucleus composed of DNA, along which the genes are located.

Deoxyribonucleic Acid (DNA)

The molecules that carry the body's genetic info.

humane genome

The order of bases on all 23 pairs of human chromosomes.

polymer

A substance composed of a large number of atoms. These atoms are usually arranged in repeating units, or monomers.

nucleotide

A repeating unit of DNA consisting of 1-4 bases (adenine, guanine, cytosine, or thymine) attached to a phosphate (sugar group)

complementing base pairing

the specific paring of base A with T and base C with G in double-stranded DNA.

proteins

Polymers of amino acids that play basic roles in the structure and function of living things.

amino acids

The building blocks of proteins.

replication

The synthesis of new DNA from existing DNA.

polymerase chain reaction (PCR)

A technique for replicating or copying a portion of a DNA strand outside a living cell.

tandem repeat

region of chromosomes that contains multiple copies of a core DNA sequence arranged in a repeating fashion

restriction enzymes

Chemical that acts as scissors to cut DNA molecules at specific locations.

restriction fragment length polymorphism (RFLPs)

Different fragment lengths of base pairs that result from cutting a DNA molecule with restriction enzymes.

electrophoresis

a technique for separating molecules through their migration on a support medium under the influence of an electrical potential

hybridization

the process of joining two complementary strands of DNA to form a double stranded molecule

primer

a short strand of DNA used to target a region of DNA for replication by PCR

short tandem repeat (STR)

a region of a DNA molecule that contains short segments of three to seven repeating base pairs

multiplexing

a technique that simultaneously detects more than one DNA marker in a single analysis

amelogenin gene

a genetic locus useful for deterring gender

Y-STR's

short tandem repeats located on the human Y chromosome

mitochondria

small structure outside the nucleus that supply energy to the cell

sequencing

a procedure used to determine the order of the base pairs that constitute DNA

picogram

one- trillionth of a gram, or 0.000000000001 gram

low copy number

fewer than eighteen DNA bearing cells

epithelial cells

the outer layer of skin cells

substrate control

an unstained object adjacent to an area on which biological material has been disposited

buccal cells

cells from the inner cheek lining

what is DNA and why is it important to forensic scientists?

DNA is the molecules that carry the body's genetic information. It is important to forensic scientist bc it is as individual as a fingerprint and can be linked biologically to hair and semen of a person.

what are genes and what is their function? of what are genes composed and where are they located?

genes are the basic unit of heredity consisting of a DNA segment located on a chromosome. Genes make proteins

with what discovery are james watson and francis crick credited?

james watson and francis crick are credited to the discovery of the structure of DNA.

Dna is a large molecule created by linking a series of repeating units. what is this type of molecule called? what are the repeating units known as?

*This molecule is called a polymer and the repeating units are known as nucleotides

Describe the basic structure of the DNA molecule. What is the name given to this type of structure?

the basic structure of the DNA molecule is two strands of DNA connected together by nucleotides . this type of structure is known as a double helix

Name the four bases associated with DNA. How are these bases paired on the DNA molecules?

the four bases associated with DNA are adenine (A) thymine (T) Guanine (G) Cytosine (C) adenine is paired with thymine and guanine is paired with cytosine.

What aspects of DNA define the role and function of a DNA molecule?

Amino acids

DNA controls inheritable traits by producing complex molecules called:

proteins

how are proteins made? what determines the shape and function of a protein molecule?

proteins are made by linking amino acids and the sequence of amino acids determines its shape and function.

what is a human genome? name two medical applications of information about the human genome.

the human genome is the order of the base on all 23 pairs of chromosomes. This order can be used to diagnose cancer and its causes and is also used to help find cures for cancer.

briefly describe the process of DNA replication

-unwinding of the DNA strands in the double helix
-each strand is then exposed to a collection of free nucleotides
-the double strand is recreated as the nucleotides assemble in the proper order

what is PCR? Why is it useful to forensic scientists?

PCR (A technique for replicating or copying a portion of a DNA strand outside a living cell.) is the outgrowth of knowledge gained from an understanding of how DNA strands naturally replicate within a cell. PCR is useful to scientists bc it offers a disti

what is recombinant DNA? How is recombinant DNA technology used to treat diabetes?

are DNA molecules formed by laboratory methods of genetic recombination (such as molecular cloning) to bring together genetic material from multiple sources, creating sequences that would not otherwise be found in biological organisms. Recombinant DNA is

What are tandem repeats? How are they useful to forensic scientists?

Regions of a chromosome that contain multiple copies of a core DNA sequence arranged in a repeating fashion. Provide a way to distinguish one individual from another through DNA typing. ( hundreds found in human genes)

what was the dominant DNA typing procedure in the untied states until the mid 1990's?

restriction fragment length polymorphisms (RFLP)

what is a short tandem repeat (STR)? why are STRs so attractive to forensic scientists?

STRs are locations on the chromosome that contain a short sequence core that repeats itself within the DNA molecule. It is the most successful and widely used DNA profiling procedure.

name two processes by which a forensic scientist can separate (STRs) for characterization.

electrophoresis and capillary electrophoresis

list two differences btwn nuclear DNA and mitochondrial DNA

Nuclear DNA is found only in the nucleus, while Mitochandrial DNA is found outside. N-DNA : arranged in a continuous strand of bases, and contributed by both parents. M-DNA : arranged in a circular loop of bases, and contributed only by mother

name one advantage and three disadvantages of mtDNA analysis compared to nuclear DNA profiling.

advantage- more abundant and more sensitive
disadvantage- time consuming, costly, and less discriminating. also, individuals of the same maternal lineage are indistinguishable by mtDNA analysis.

what is CODIS? how is it useful to forensic scientists?

*It is a computerized program from FBI. It is the system of tracking DNA (usually sex offenders)

approximately how many DNA- bearing cells are needed to obtain an STR profile/ what term is used to describe the quantity of DNA that is below this normal level of detection?

18 low copy number ( don't need to know this one)

what type of gloves should an evidence collector wear when handling biological evidence? name two reasons he or she should wear this type of glove.

latex gloves because all body fluids should be assumed infectious and we want to prevent contamination

what type of packaging should not be used for biological evidence? why? why type of packaging should be used instead for articles containing biological evidence?

want to avoid plastic, air tight containers to avoid mold growth and contamination should use paper bags or card board boxes

how should packages containing biological evidence be stored until they are delivered to a laboratory?

refrigerated or in some kind of cool location where it is avoiding the sun light

what substance should be added to blood samples collected from a crime scene? name two reasons for adding this substance to blood evidence.

preservative EDTA preserves enzymes to prevent DNA from breaking down and also prevents mold growth

name and describe the least intrusive method for obtaining a DNA standard/reference.

buccal swab which is a swab of the cheek cells

list four ways to minimize contamination of biological evidence.

change gloves before handling new evidence, collect substate control for comparisons, pick up small items of evidence with clean forceps, and package each piece of evidence in a well ventilated container

examples of polymers that contain repeating units known as nucleotides are:

DNA

how many different bases are associated with the makeup of DNA?

4

assume that two strands of DNA have been separated and that the base sequence on one strand is ATGC. State the sequence of bases on the second strand

TACG

the production of amino acids is coded by a sequence of how may bases on the DNA molecule?

*

portions of the DNA molecule useful for DNA typing:
a. code for the production of proteins
b. are useful for recombinant DNA
c. are repeated many times
d. are useful for the production of insulin
e. can determine if a person has sickle-cell anemia

c. are repeated many times

which of the following is false?
a. RFLP and STR segments are both tandem repeats
b. RFLP strands are more likely to decompose as compared to STRs.
c. RFLP strands are to long to be amplifies by PCR
d. RFLP DNA strands are much shorter in length than STRs

d. RFLP DNA strands are much shorter in length than STRs (false)

the concept of simultaneously extracting, amplifying, and detecting a combination of STRs is known as:

Multiplexing

the fundamental hit of heredity is the ___.

gene

each gene is actually composed of ___, specifically designed to carry out a single body function.

DNA

a(n) ____ is a very large molecule made by linking a series of repeating units

polymer

a(n) ____ is composed of a sugar molecule, a phosphate-containing group, and a nitrogen containing molecule called a base.

nucleotide

DNA is actually a very large molecule made by linking a series of ____ to form a natural polymer.

monomers

___ different bases are associated with the makeup of DNA

nucleotides

watson and crick demonstrated that DNA is composed of two strands coiled into the shape of a(n)____.

double helix

the structure of DNA requires the pairing of base A to ___ and base G to ___.

T; C

The base sequence T-G-C-A can be paired with the base sequence____ in a double helix configuration

A-C-G-T

the inheritable traits that are controlled by DNA arise out of DNA's ability to direct the production of ____.

proteins

___ are derived from the combination of up to twenty known amino acids

proteins

the production of an amino acid is controlled by a sequence of ___ bases on the DNA molecule

3

true or false: enzymes known as DNA polymerase assemble new DNA strands into proper base sequence during replication

true

true or false: DNA can be copies outside a living cell

true

recombinant DNA relies on the ability of chemicals known as ___ to cut DNA into fragments.

restriction enzymes

in RFLP DNA typing restriction enzymes are used to cut out___ sequences from the DNA molecule.

repeating

in RFLP DNA typing restriction enzymes are used to cut out sequences of DNA with different ___.

lengths

DNA fragments can be sorted according to their size by the technique of____.

electrophoresis

In the RFLP DNA typing process, DNA fragments are transferred to a nylon membrane by a process called ____ blotting

*southern

true or false: specimen amenable to DNA typing are blood, semen, body tissue, and hair.

true

short DNA segments containing repeating sequences of three to seven bases are called ____.

STRs

true or false: the longer the DNA strand, the less susceptible it is to degradation.

false

the short length of STRs allows them to replicated by ____.

PCR

the concept of ____ involves simultaneous detection of more than one DNA marker.

multiplexing

DNA fragments can be separated and identified by ____.

capillary electrophoresis

mitochondrial DNA is inherited from the ____.

mother

true or false: mitochondrial DNA is kore plentiful in the human cell than is nuclear DNA.

true

the national DNA database in the untied states has standardized on ____ STRs for the entry into the database.

13

small amounts of blood are best submitted to a crime laboratory in a ____ condition.

dry

true or false: airtight packages make the best containers for blood-containing evidence.

false

A goes to what in mRNA?

A -> U

A goes to what in DNA?

A -> T